cyberneticlibrary

Run genomics sequencing workflows

ngs-epigenomics-peaksskillsetup L32,192
openai/plugins
What it does

Dispatch epigenomics analysis workflows

Best for

Dispatching ATAC-seq, ChIP-seq, CUT&RUN, and CUT&Tag analysis to assay-specific QC, alignment, peak-calling, and differential workflows.

Inputs
  • · Output file path
  • · Profile/environment selector
Outputs
  • · JSON output
  • · Status dashboard
  • · Report or summary
  • · Validation results
Requires
  • · Nextflow, nf-core pipelines
Trust signals
  • · Output format documented
  • · Public repository with issue tracking
  • · Test profile or example data included
  • · Complete workflow documented