Perform genomic interval operations
polars-bioskillsetup L2★27,559
K-Dense-AI/scientific-agent-skills ↗What it does
Process genomic and proteomic data at scale using Polars
Best for
Large-scale genomics workflows with fast aggregation and filtering
Inputs
- · genomic tables (VCF, TSV)
- · expression matrices
- · annotation files
Outputs
- · filtered variants
- · expression summaries
- · merged annotation tables
Requires
- · Polars
- · polars-bio
- · numpy
- · scipy
Preconditions
Polars >= 0.15; genomic data in standard formats
Failure modes
Memory overflow on huge tables; VCF parsing incorrect; annotation mismatch