Visualize genomic data for publications

visualization-workflowskillsetup L2★35

What it does

Create deepTools heatmaps, IGV views, and UCSC track hubs for genomic data

Best for

Publishing ENCODE or genomic analysis requiring multi-mark visualization

Inputs

Outputs

Requires

Preconditions

ChIP-seq or ATAC-seq signal tracks available

Failure modes

Missing bigWig headers; region bed out-of-bounds; color scheme unreadable for colorblind audience

Trust signals