Manage biological dataset lineage and versioning
lamindbskillsetup L2★27,559
K-Dense-AI/scientific-agent-skills ↗What it does
Index and query biological datasets via SQL-queryable registry
Best for
Building a lineage-tracked, versioned registry of biological datasets for reproducible analysis
Inputs
- · biological data files (AnnData, Zarr, Parquet)
- · metadata annotations
Outputs
- · searchable dataset registry
- · versioned data snapshots
Requires
- · LaminDB Python package
- · PostgreSQL or SQLite backend
Preconditions
LaminDB installed; data in supported formats
Failure modes
- · Schema drift across versions
- · Large dataset indexing latency
- · Metadata annotation incomplete
Trust signals
- · SQL queryability
- · Versioning built-in
- · Lineage tracking