cyberneticlibrary

Parse flow cytometry data files

flowioskillsetup L127,559
K-Dense-AI/scientific-agent-skills
What it does

Parse and extract FCS flow cytometry files

Best for

Flow cytometry experiments requiring FCS file parsing and event data extraction.

Inputs
  • · FCS file path
  • · Optional: channel filter, only_text flag
Outputs
  • · NumPy event array
  • · Channel metadata dict
  • · FCS version info
Requires
  • · NumPy
Preconditions
  • · Valid FCS v2.0-3.1 file
  • · Read permissions
Failure modes
  • · Offset discrepancies
  • · Corrupted file
  • · Unsupported FCS version
Trust signals
  • · BSD-3-Clause license
  • · K-Dense Inc. maintained
  • · FCS spec v2.0-3.1 support