Query cancer dependency databases
depmapskillsetup L2★27,559
K-Dense-AI/scientific-agent-skills ↗What it does
Query genome-scale CRISPR knockout dependencies
Best for
One-query CRISPR dependency lookups for target prioritization.
Inputs
- · Gene name or Ensembl ID
- · cell line name
Outputs
- · Dependency score
- · essentiality classification
- · common essential genes
Requires
- · DepMap REST API
Preconditions
Internet, DepMap account optional
Failure modes
Gene not in DepMap, cell line not screened, API rate limit
Trust signals
- · Broad Institute maintained
- · Covers 1000+ cell lines